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Survival-associated eQTLs across different cancer types


We identified 22,212 eQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "STAD"
e.g., "rs1824937"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
UVM rs113080663 chr20:30422704 T/G 6.07E-5 67 27.9 14.23 7.6 KM Plot
UVM rs113388793 chr2:201771341 G/A 2.98E-7 67 24.77 27.9 1.27 KM Plot
UVM rs113428245 chr20:30373051 CTG/C 6.07E-5 67 27.9 14.23 7.6 KM Plot
UVM rs113580952 chr20:30349164 C/T 6.07E-5 67 27.9 14.23 7.6 KM Plot
UVM rs113582691 chr2:201962849 T/TA 3.74E-7 66 24.62 27.9 1.27 KM Plot
UVM rs113665162 chr20:30235882 C/T 6.07E-5 67 27.9 14.23 7.6 KM Plot
UVM rs11422450 chr12:9809454 T/TA 0.000125 67 27.88 21.8 7.6 KM Plot
UVM rs11470592 chr20:30346081 CCTAA/C 6.07E-5 67 27.9 14.23 7.6 KM Plot
UVM rs11608817 chr12:9767607 A/G 0.00014 66 27.37 21.8 7.6 KM Plot
UVM rs116858684 chr20:30344418 T/C 0.000118 67 27.92 8.18 7.6 KM Plot
UVM rs117013514 chr20:30318470 C/T 0.000118 67 27.92 8.18 7.6 KM Plot
UVM rs117015937 chr20:30237189 C/T 0.000118 67 27.92 8.18 7.6 KM Plot
UVM rs11708227 chr3:53748033 T/C 1.25E-8 66 27.9 27.63 12.33 KM Plot
UVM rs11709505 chr3:53749498 T/C 1.25E-8 66 27.9 27.63 12.33 KM Plot
UVM rs11719179 chr3:53759721 A/G 0.000121 67 27.9 27.37 12.33 KM Plot